Diabetes¶
Name: Diabetes
Description: Framework for a diabetes model, including vital dynamics and new cases
Contents¶
Compartments¶
Compartment: Source¶
Code name:
source
Is source
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Susceptible¶
Code name:
sus
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Unaware & uncomplicated¶
Code name:
unsc_uncomp
Value can be used for calibration
Appears in the databook
Description:
Data entry guidance:
Compartment: Unaware & vascular damage¶
Code name:
unsc_vd
Value can be used for calibration
Appears in the databook
Databook values will be used for model initialization
Description:
Data entry guidance:
Compartment: Screened & uncomplicated¶
Code name:
sc_uncomp
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Screened & vascular damage¶
Code name:
sc_vd
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Diagnosed & uncomplicated¶
Code name:
dx_uncomp
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Diagnosed & vascular damage¶
Code name:
dx_vd
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Successful treatment & uncomplicated¶
Code name:
txs_uncomp
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Successful treatment & vascular damage¶
Code name:
txs_vd
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Treatment failure & uncomplicated¶
Code name:
txf_uncomp
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Treatment failure & vascular damage¶
Code name:
txf_vd
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Dead (diabetes)¶
Code name:
dead_dm
Is sink
Does not appear in the databook
Description:
Data entry guidance:
Compartment: Dead (other)¶
Code name:
dead_other
Is sink
Does not appear in the databook
Description:
Data entry guidance:
Characteristics¶
Characteristic: Population size¶
Code name:
alive
Value can be used for calibration
Includes:
Susceptible
Unaware & uncomplicated
Unaware & vascular damage
Screened & uncomplicated
Screened & vascular damage
Diagnosed & uncomplicated
Diagnosed & vascular damage
Successful treatment & uncomplicated
Successful treatment & vascular damage
Treatment failure & uncomplicated
Treatment failure & vascular damage
Appears in the databook
Databook values will be used for model initialization
Description:
Data entry guidance:
Characteristic: All people with T2DM¶
Code name:
ch_all
Value can be used for calibration
Includes:
Unaware & uncomplicated
Unaware & vascular damage
Screened & uncomplicated
Screened & vascular damage
Diagnosed & uncomplicated
Diagnosed & vascular damage
Successful treatment & uncomplicated
Successful treatment & vascular damage
Treatment failure & uncomplicated
Treatment failure & vascular damage
Appears in the databook
Databook values will be used for model initialization
Description:
Data entry guidance:
Characteristic: People screened for T2DM¶
Code name:
ch_screened
Value can be used for calibration
Includes:
Screened & uncomplicated
Screened & vascular damage
Diagnosed & uncomplicated
Diagnosed & vascular damage
Successful treatment & uncomplicated
Successful treatment & vascular damage
Treatment failure & uncomplicated
Treatment failure & vascular damage
Appears in the databook
Databook values will be used for model initialization
Description:
Data entry guidance:
Characteristic: People diagnosed with T2DM¶
Code name:
ch_diag
Value can be used for calibration
Includes:
Diagnosed & uncomplicated
Diagnosed & vascular damage
Successful treatment & uncomplicated
Successful treatment & vascular damage
Treatment failure & uncomplicated
Treatment failure & vascular damage
Appears in the databook
Databook values will be used for model initialization
Description:
Data entry guidance:
Characteristic: People treated for T2DM¶
Code name:
ch_tx
Value can be used for calibration
Includes:
Successful treatment & uncomplicated
Successful treatment & vascular damage
Treatment failure & uncomplicated
Treatment failure & vascular damage
Appears in the databook
Databook values will be used for model initialization
Description:
Data entry guidance:
Characteristic: People with HbA1c control¶
Code name:
ch_succ
Value can be used for calibration
Includes:
Successful treatment & uncomplicated
Successful treatment & vascular damage
Appears in the databook
Databook values will be used for model initialization
Description:
Data entry guidance:
Characteristic: Proportion screened for T2DM¶
Code name:
ch_propscreened
Includes:
People screened for T2DM
Denominator: All people with T2DM
Does not appear in the databook
Description:
Data entry guidance:
Characteristic: Proportion diagnosed with T2DM¶
Code name:
ch_propdiag
Includes:
People diagnosed with T2DM
Denominator: All people with T2DM
Does not appear in the databook
Description:
Data entry guidance:
Characteristic: Proportion treated for T2DM¶
Code name:
ch_proptx
Includes:
People treated for T2DM
Denominator: All people with T2DM
Does not appear in the databook
Description:
Data entry guidance:
Characteristic: Proportion with HbA1c control¶
Code name:
ch_propsucc
Includes:
People with HbA1c control
Denominator: All people with T2DM
Does not appear in the databook
Description:
Data entry guidance:
Parameters¶
Parameter: Annual number of births¶
Code name:
birth_rate
Units/format: number
Value restrictions: At least 0
Contributes to transitions from:
“Source” to “Susceptible”
Default value: 15828
Appears in the databook
Description:
Data entry guidance:
Parameter: Estimated number of new diabetes cases annually¶
Code name:
num_acq
Units/format: number
Value restrictions: At least 0
Default value: None
Appears in the databook
Used to compute:
“Acquisition rate”
Description:
Data entry guidance:
Parameter: Acquisition rate¶
Code name:
acq_rate
Units/format: probability
Value restrictions: 0-1.0000
Contributes to transitions from:
“Susceptible” to “Unaware & uncomplicated”
Default value: None
Does not appear in the databook
This parameter’s value is computed by a function:
num_acq/max(sus,num_acq)
Depends on:
“Estimated number of new diabetes cases annually”
“Susceptible”
Description:
Data entry guidance:
Parameter: Time before progression to vascular damage¶
Code name:
prog_rate
Units/format: duration
Value restrictions: At least 0
Contributes to transitions from:
“Unaware & uncomplicated” to “Unaware & vascular damage”
“Screened & uncomplicated” to “Screened & vascular damage”
“Diagnosed & uncomplicated” to “Diagnosed & vascular damage”
“Treatment failure & uncomplicated” to “Treatment failure & vascular damage”
Default value: 1
Appears in the databook
Description:
Data entry guidance:
Parameter: Annual number screened¶
Code name:
num_screen
Units/format: number
Value restrictions: At least 0
Default value: None
Appears in the databook
Used to compute:
“Annual number screened positive”
Description:
Data entry guidance:
Parameter: Yield among those screened¶
Code name:
screen_yield
Units/format: probability
Value restrictions: 0-1.0000
Default value: None
Does not appear in the databook
This parameter’s value is computed by a function:
(unsc_uncomp+unsc_vd)/(unsc_uncomp+unsc_vd+sus)
Depends on:
“Unaware & uncomplicated”
“Susceptible”
“Unaware & vascular damage”
Used to compute:
“Annual number screened positive”
Description:
Data entry guidance:
Parameter: Annual number screened positive¶
Code name:
pos_screen
Units/format: number
Value restrictions: At least 0
Default value: None
Does not appear in the databook
This parameter’s value is computed by a function:
num_screen*screen_yield
Depends on:
“Annual number screened”
“Yield among those screened”
Used to compute:
“Screening sensitivity”
Description:
Data entry guidance:
Parameter: Screening sensitivity¶
Code name:
screen
Value can be used for calibration
Units/format: probability
Value restrictions: 0-1.0000
Contributes to transitions from:
“Unaware & uncomplicated” to “Screened & uncomplicated”
“Unaware & vascular damage” to “Screened & vascular damage”
Default value: None
Does not appear in the databook
This parameter’s value is computed by a function:
pos_screen/max(unsc_uncomp+unsc_vd,pos_screen)
Depends on:
“Unaware & uncomplicated”
“Annual number screened positive”
“Unaware & vascular damage”
Description:
Data entry guidance:
Parameter: Annual number of new diagnoses¶
Code name:
num_diag
Units/format: number
Value restrictions: At least 0
Default value: None
Appears in the databook
Used to compute:
“Diagnosis sensitivity”
Description:
Data entry guidance:
Parameter: Diagnosis sensitivity¶
Code name:
diag
Value can be used for calibration
Units/format: probability
Value restrictions: 0-1.0000
Contributes to transitions from:
“Screened & uncomplicated” to “Diagnosed & uncomplicated”
“Screened & vascular damage” to “Diagnosed & vascular damage”
Default value: None
Does not appear in the databook
This parameter’s value is computed by a function:
num_diag/max(sc_uncomp+sc_vd,num_diag)
Depends on:
“Screened & vascular damage”
“Annual number of new diagnoses”
“Screened & uncomplicated”
Description:
Data entry guidance:
Parameter: Annual number newly initiated onto treatment¶
Code name:
num_initiate
Units/format: number
Value restrictions: At least 0
Default value: None
Appears in the databook
Used to compute:
“Initiation rate”
Description:
Data entry guidance:
Parameter: Initiation rate¶
Code name:
initiate
Value can be used for calibration
Units/format: probability
Value restrictions: 0-1.0000
Contributes to transitions from:
“Diagnosed & uncomplicated” to “Successful treatment & uncomplicated”
“Diagnosed & vascular damage” to “Successful treatment & vascular damage”
Default value: None
Does not appear in the databook
This parameter’s value is computed by a function:
num_initiate/max(dx_uncomp+dx_vd,num_initiate)
Depends on:
“Diagnosed & uncomplicated”
“Diagnosed & vascular damage”
“Annual number newly initiated onto treatment”
Description:
Data entry guidance:
Parameter: Treatment failure rate¶
Code name:
treat_fail
Value can be used for calibration
Units/format: probability
Value restrictions: 0-1.0000
Contributes to transitions from:
“Successful treatment & uncomplicated” to “Treatment failure & uncomplicated”
“Successful treatment & vascular damage” to “Treatment failure & vascular damage”
Default value: 0.5
Appears in the databook
Description:
Data entry guidance:
Parameter: Proportion of those experiencing treatment failure who are offered support¶
Code name:
treat_suc
Value can be used for calibration
Units/format: probability
Value restrictions: 0-1.0000
Contributes to transitions from:
“Treatment failure & uncomplicated” to “Successful treatment & uncomplicated”
“Treatment failure & vascular damage” to “Successful treatment & vascular damage”
Default value: None
Appears in the databook
Description:
Data entry guidance:
Parameter: Death rate for diabetes with vascular damage¶
Code name:
death_vd
Units/format: probability
Value restrictions: 0-1.0000
Contributes to transitions from:
“Unaware & vascular damage” to “Dead (diabetes)”
“Screened & vascular damage” to “Dead (diabetes)”
“Diagnosed & vascular damage” to “Dead (diabetes)”
“Successful treatment & vascular damage” to “Dead (diabetes)”
“Treatment failure & vascular damage” to “Dead (diabetes)”
Default value: 0.025
Appears in the databook
Description:
Data entry guidance:
Parameter: Background mortality rate¶
Code name:
death_other
Units/format: probability
Value restrictions: 0-1.0000
Contributes to transitions from:
“Susceptible” to “Dead (other)”
“Unaware & uncomplicated” to “Dead (other)”
“Unaware & vascular damage” to “Dead (other)”
“Screened & uncomplicated” to “Dead (other)”
“Screened & vascular damage” to “Dead (other)”
“Diagnosed & uncomplicated” to “Dead (other)”
“Diagnosed & vascular damage” to “Dead (other)”
“Successful treatment & uncomplicated” to “Dead (other)”
“Successful treatment & vascular damage” to “Dead (other)”
“Treatment failure & uncomplicated” to “Dead (other)”
“Treatment failure & vascular damage” to “Dead (other)”
Default value: 0.015
Appears in the databook
Description:
Data entry guidance:
Interactions¶
Cascades¶
Cascade: Diabetes care cascade¶
Description:
Stages:
All people with T2DM
Unaware & uncomplicated
Unaware & vascular damage
Screened & uncomplicated
Screened & vascular damage
Diagnosed & uncomplicated
Diagnosed & vascular damage
Successful treatment & uncomplicated
Successful treatment & vascular damage
Treatment failure & uncomplicated
Treatment failure & vascular damage
Screened
Screened & uncomplicated
Screened & vascular damage
Diagnosed & uncomplicated
Diagnosed & vascular damage
Successful treatment & uncomplicated
Successful treatment & vascular damage
Treatment failure & uncomplicated
Treatment failure & vascular damage
Diagnosed
Diagnosed & uncomplicated
Diagnosed & vascular damage
Successful treatment & uncomplicated
Successful treatment & vascular damage
Treatment failure & uncomplicated
Treatment failure & vascular damage
Treated
Successful treatment & uncomplicated
Successful treatment & vascular damage
Treatment failure & uncomplicated
Treatment failure & vascular damage
HbA1c control
Successful treatment & uncomplicated
Successful treatment & vascular damage
Cascade: Diabetes care cascade - vascular damage¶
Description:
Stages:
All people
Unaware & vascular damage
Screened & vascular damage
Diagnosed & vascular damage
Successful treatment & vascular damage
Treatment failure & vascular damage
Screened
Screened & vascular damage
Diagnosed & vascular damage
Successful treatment & vascular damage
Treatment failure & vascular damage
Diagnosed
Diagnosed & vascular damage
Successful treatment & vascular damage
Treatment failure & vascular damage
Treated
Successful treatment & vascular damage
Treatment failure & vascular damage
HbA1c control
Successful treatment & vascular damage
Cascade: Diabetes care cascade - uncomplicated cases¶
Description:
Stages:
All people
Unaware & uncomplicated
Screened & uncomplicated
Diagnosed & uncomplicated
Successful treatment & uncomplicated
Treatment failure & uncomplicated
Screened
Screened & uncomplicated
Diagnosed & uncomplicated
Successful treatment & uncomplicated
Treatment failure & uncomplicated
Diagnosed
Diagnosed & uncomplicated
Successful treatment & uncomplicated
Treatment failure & uncomplicated
Treated
Successful treatment & uncomplicated
Treatment failure & uncomplicated
HbA1c control
Successful treatment & uncomplicated